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MS Software

SCILS™实验室

Easy to use

Supports all major Bruker instruments and data from other major mass spectrometry vendors.

可视化

2D和3D可视化允许在药品，医学和工业研究中进行多种应用。必威东盟体育

分析

Advanced processing and analysis with next generation machine learning algorithms.

融合的

Integral part of the MALDI Molecular Drug Imager, the rapifleX MALDI Tissuetyper, and the SpatialOMx workflows from timsTOF fleX.

Características

SCILS实验室

用于MS成像数据分析的软件

分析and visualization of MALDI Imaging data has never been easier with the software from Bruker.

强大的可视化和报告

离子图像和质谱的即时和直观可视化
Flexible rendering options for visualizing spatial compound distributions and distribution patterns
Compelling statistical charts and reports
3D MS成像研究的体积可视化（可选）

高级数据处理和分析

高级机器学习算法，用于几乎无限尺寸的数据集
比较分析，用于发现歧视性和相关光谱特征
无靶向聚类和数据挖掘的无监督空间分割和组件分析
用于表征临床和临床前研究区域的元数据注释
Classification models for categorization of unlabeled samples
Analyte quantitation based on dilution series

Workflow and extensibility

Comprehensive tools for all kinds of targeted and untargeted SpatialOMx workflows
Integration with histological annotations from digital pathology
Extensive application programming interface (API) for automated reporting and advanced workflow integration
Export MS imaging data to the open industry standard imzML
Import MS imaging datasets from imzML or from various third party vendors’ imaging data formats (optional)

SCILS™实验室is the industry’s tool of choice for deriving new insights from mass spectrometry imaging data. Used across science and industry, the software sets new standards in analysis and visualization, simplifying everyday work and boosting research output.

System requirements
The following system requirements are recommended:

Intel Core i7 processor or Intel Xeon processor (or equivalent) with at least 4 cores
Microsoft Windows 10 64位操作系统
64 GB RAM
1 TB solid-state drive (SSD, SATA III or M.2)
全高清显示器（1920 x 1080）
Graphics board supporting OpenGL 3.2

为了best performance, an SSD should be used to host the SCiLS™ Lab data files. Best system performance is achieved using a RAID0 configuration of multiple SATA III or M.2 SSDs.

Benefícios

SCILS实验室

World-leading software for analysis of mass spectrometry imaging data

SCILS™实验室integrates data from all major mass spectrometry vendors, including Bruker’sFlex系列and先生女士，以及以打开IMZML格式提供的数据集。为了Timstof Flexion mobility data, SCiLS™ Lab displays mass-mobility ion images allowing CCS-aware data interpretation.

可以在2D和3D中看到多个样品的比较分析药物开发，，，，tissue-resolved biomarker discovery和转化病理研究以补充免疫组织化学。

SCILS™实验室支持直接从组织中对目标分子进行MSI定量的直观工作流。它与来自空间的工作流程集成MetaboScape^®and visualizes the annotated MALDI molecular tissue images of detected features (metabolites, lipids, glycans). For integration with histology, SCiLS™ Lab provides an interface to the powerful open source softwareQUPATHwidely used in digital pathology.

aplicações

SCILS实验室

Label-free MS imaging for all classes of molecules – from proteins to small molecules

SCILS™实验室can be used for the analysis of multipleMALDI成像数据集，允许它们并排装卸。几乎无限大小的数据集的组成可以可视化并统计分析以详细解释。此外，SCILS™实验室可用于从连续的2D MALDI成像数据集生成和可视化3D模型。

在3D重建49个矢状小鼠脑切片的3D重建中的三个不同m/z值的分布，其中包含带有SCILS™实验室的非近端化小脑肿瘤。

Statistical analysis with SCiLS™ Lab: Automatically group samples according to Metadata provided with experiments – perform classification and prediction with machine learning methods for tissue typing or biomarker discovery.

Large sample cohorts in clinical research studies
In clinical biomarker studies for the发现区分离子,大样本人群和大量的数据ed to be analyzed. SCiLS™ Lab makes it easy to link sample metainformation to MALDI MSI data, saving time and avoiding errors. Histological annotations from digital pathology are integrated using an interface to the powerful and widely used open source applicationQUPATH。

自动阐明光谱特征很容易区分病理生理改变。只需单击一次，SCILS™实验室就可以自动量化离子在不同生物态之间的区分。最终的新型生物标志物候选者列表很容易出口以进行后续分析。

发现功能强大的数据挖掘功能，这些功能现在只需单击即可！

全身成像
The visualization ofdrug and metabolite distributionswithin whole-body tissue sections remains a challenging methodology with respect to sample processing, acquisition, and computational data analysis.

SCILS™实验室offers tools for the entire MALDI MSI data analysis workflow. Multiple data sets composed of millions of spectra can be processed using one software, from the registration of multiple individual data sets over spectral preprocessing to comprehensive statistical analysis.